[HTML][HTML] STRIDE–An integrated standards-based translational research informatics platform

HJ Lowe, TA Ferris, PM Hernandez… - AMIA annual symposium …, 2009 - ncbi.nlm.nih.gov
Abstract STRIDE (Stanford Translational Research Integrated Database Environment) is a
research and development project at Stanford University to create a standards-based …

Breast cancer treatment across health care systems: linking electronic medical records and state registry data to enable outcomes research

AW Kurian, A Mitani, M Desai, PP Yu, T Seto… - Cancer, 2014 - Wiley Online Library
BACKGROUND Understanding of cancer outcomes is limited by data fragmentation. In the
current study, the authors analyzed the information yielded by integrating breast cancer data …

Disease risk factors identified through shared genetic architecture and electronic medical records

L Li, DJ Ruau, CJ Patel, SC Weber, R Chen… - Science translational …, 2014 - science.org
Genome-wide association studies have identified genetic variants for thousands of diseases
and traits. We evaluated the relationships between specific risk factors (for example, blood …

A simple heuristic for blindfolded record linkage

SC Weber, H Lowe, A Das… - Journal of the American …, 2012 - academic.oup.com
Objectives To address the challenge of balancing privacy with the need to create cross-site
research registry records on individual patients, while matching the data for a given patient …

Autoantibodies in chronic hepatitis C virus infection: impact on clinical outcomes and extrahepatic manifestations

AJ Gilman, AK Le, C Zhao, J Hoang… - BMJ Open …, 2018 - bmjopengastro.bmj.com
Goals To examine the role that autoantibodies (auto-abs) play in chronic hepatitis C virus
(HCV) regarding demographics, presence of extrahepatic manifestations and long-term …

[HTML][HTML] Oncoshare: lessons learned from building an integrated multi-institutional database for comparative effectiveness research

SC Weber, T Seto, C Olson, P Kenkare… - AMIA Annual …, 2012 - ncbi.nlm.nih.gov
Comparative effectiveness research (CER) using observational data requires informatics
methods for the extraction, standardization, sharing, and integration of data derived from a …

[HTML][HTML] Clinical arrays of laboratory measures, or “clinarrays”, built from an electronic health record enable disease subtyping by severity

DP Chen, SC Weber, PS Constantinou… - AMIA Annual …, 2007 - ncbi.nlm.nih.gov
The severity of diseases has often been assigned by direct observation of a patient and by
pathological examination after symptoms have appeared. As we move into the genomic era …

Novel integration of hospital electronic medical records and gene expression measurements to identify genetic markers of maturation

DP Chen, SC Weber, PS Constantinou… - Biocomputing …, 2008 - World Scientific
Traditionally, the elucidation of genes involved in maturation and aging has been studied in
a temporal fashion by examining gene expression at different time points in an organism's …

[HTML][HTML] Autoimmune Hemolytic Anemia Confers Risk of Thromboembolism That Is Not Attributable to Usual Thrombosis Risk Factors: A Longitudinal, Retrospective …

EC Chen, PD Loftus, SC Weber, NM Hoang, J Gilbert… - Blood, 2016 - Elsevier
INTRODUCTION Autoimmune hemolytic anemia (AIHA) is a rare autoimmune disorder in
which auto-antibodies target red blood cell surface antigens, causing hemolysis. The …

[CITATION][C] Gender differences in outcomes of cirrhosis in a large cohort of patients in the United States

A Yeluru, P Nguyen, AK Le, C Zhao, J Hoang… - Gastroenterology, 2017 - Elsevier